Basic Information
Locus ID:
Ceq07G0505
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
calcium-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 4390454 | 4391176 | + | Ceq07G0505 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 22,080.91 Da | 36.35 | 86.40 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 86 | 148 | 7.2982E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 10 | 72 | 1.6E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 85 | 147 | 2.0E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 4 | 148 | 2.0E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 2 | 161 | 2.0E-44 | - |
| SMART | SM00054 | efh_1 | 122 | 150 | 1.5E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 86 | 114 | 0.0012 | IPR002048 |
| SMART | SM00054 | efh_1 | 11 | 39 | 0.095 | IPR002048 |
| SMART | SM00054 | efh_1 | 47 | 75 | 0.17 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 82 | 117 | 14.42972 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 118 | 153 | 13.453381 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 43 | 78 | 10.105932 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 7 | 42 | 12.923368 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 20 | 32 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 56 | 68 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 131 | 143 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 95 | 107 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_041010429.1 | probable calcium-binding protein CML16 [Juglans microcarpa x Juglans regia] | 0 |
| Q9LI84 | Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6QZT6 | Calcium-binding protein CML16 OS=Carpinus fangiana OX=176857 GN=FH972_008791 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology