Basic Information
Locus ID:
Ceq07G0313
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Introduction of a cis double bond between carbons of the acyl chain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 2525686 | 2539097 | + | Ceq07G0313 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.63 | 94,118.85 Da | 47.46 | 74.16 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01050 | Acyl_ACP_Desat | 455 | 761 | 1.33861E-151 | IPR005067 |
| CDD | cd01050 | Acyl_ACP_Desat | 52 | 370 | 4.73412E-120 | IPR005067 |
| Pfam | PF03405 | Fatty acid desaturase | 52 | 342 | 4.7E-113 | IPR005067 |
| Pfam | PF03405 | Fatty acid desaturase | 780 | 827 | 1.2E-7 | IPR005067 |
| Pfam | PF03405 | Fatty acid desaturase | 455 | 776 | 1.3E-142 | IPR005067 |
| SUPERFAMILY | SSF47240 | Ferritin-like | 781 | 832 | 2.76E-5 | IPR009078 |
| SUPERFAMILY | SSF47240 | Ferritin-like | 48 | 389 | 3.61E-86 | IPR009078 |
| SUPERFAMILY | SSF47240 | Ferritin-like | 444 | 781 | 3.12E-108 | IPR009078 |
| Gene3D | G3DSA:1.10.620.20 | Ribonucleotide Reductase, subunit A | 781 | 832 | 1.1E-14 | IPR012348 |
| Gene3D | G3DSA:1.10.620.20 | Ribonucleotide Reductase, subunit A | 36 | 340 | 1.5E-114 | IPR012348 |
| Gene3D | G3DSA:1.10.620.20 | Ribonucleotide Reductase, subunit A | 440 | 780 | 4.4E-150 | IPR012348 |
| Gene3D | G3DSA:1.10.620.20 | Ribonucleotide Reductase, subunit A | 341 | 391 | 1.1E-12 | IPR012348 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Reaction:
R03370 (Octadecanoyl-[acyl-carrier protein] + 2 Reduced ferredoxin + Oxygen + 2 H+ <=> Oleoyl-[acyl-carrier protein] + 2 Oxidized ferredoxin + 2 H2O)
R08161 (Hexadecanoyl-[acp] + 2 Reduced ferredoxin + Oxygen + 2 H+ <=> Hexadecenoyl-[acyl-carrier protein] + 2 Oxidized ferredoxin + 2 H2O)
R11108 (Hexadecanoyl-[acp] + 2 Reduced ferredoxin + Oxygen + 2 H+ <=> (4Z)-Hexadec-4-enoyl-[acyl-carrier protein] + 2 Oxidized ferredoxin + 2 H2O)
R11109 (Hexadecanoyl-[acp] + 2 Reduced ferredoxin + Oxygen + 2 H+ <=> (6Z)-Hexadec-6-enoyl-[acyl-carrier protein] + 2 Oxidized ferredoxin + 2 H2O)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43710.1 | Plant stearoyl-acyl-carrier-protein desaturase family protein. Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates. | 0 |
| RefSeq | XP_040996675.1 | stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Juglans microcarpa x Juglans regia] | 0 |
| P22337 | Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic OS=Ricinus communis OX=3988 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J6G7D2 | Acyl-[acyl-carrier-protein] desaturase OS=Cannabis sativa OX=3483 GN=F8388_021992 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 1 | Sgl07025 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30080760 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq07G0313, Ceq07G0315 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl07G0319, Cgl07G0321, Cgl07G0322 |