Basic Information
Locus ID:
Ceq06G1507
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 17468801 | 17473348 | - | Ceq06G1507 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 95,160.36 Da | 43.45 | 71.84 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 533 | 757 | 4.6E-73 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 150 | 207 | 6.6E-16 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 345 | 490 | 7.7E-54 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 344 | 760 | 1.5E-195 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 155 | 205 | 1.3E-11 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 549 | 723 | 1.5E-195 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 403 | 437 | 9.393891 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 809 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 95 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_018805595.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Juglans regia] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QHD3 | ribonuclease P OS=Carpinus fangiana OX=176857 GN=FH972_003239 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology