Basic Information
Locus ID:
Ceq06G1393
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 14522795 | 14524733 | + | Ceq06G1393 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 27,005.57 Da | 37.45 | 68.04 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 14 | 236 | 2.1E-85 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 124 | 226 | 8.14E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 121 | 238 | 6.0E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 127 | 227 | 22.599775 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_023895683.1 | auxin-induced protein AUX28-like [Quercus suber] | 0 |
| P13089 | Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7N2RF84 | Auxin-responsive protein OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology