Basic Information
Locus ID:
Ceq06G1053
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 10363472 | 10368068 | - | Ceq06G1053 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.70 | 64,917.51 Da | 57.89 | 59.58 | -1.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 443 | 528 | 2.2E-18 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 443 | 528 | 1.4E-29 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 234 | - | - |
| Coils | Coil | Coil | 432 | 469 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_028217551.1 | calponin homology domain-containing protein DDB_G0272472-like [Glycine soja] | 0 |
| TrEMBL | A0A5N6QTU4 | PAPA-1 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_005783 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology