Basic Information
Locus ID:
Ceq06G0157
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 1440544 | 1450411 | - | Ceq06G0157 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 113,894.02 Da | 33.30 | 84.17 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 44 | 321 | 1.41666E-178 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 362 | 453 | 9.7E-18 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 608 | 828 | 7.6E-49 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 45 | 357 | 6.6E-93 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 910 | 1014 | 2.8E-12 | IPR041147 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 33 | 358 | 4.08E-108 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 467 | 1018 | 2.2E-140 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 361 | 455 | 4.25E-26 | IPR028995 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 326 | 404 | 2.0E-30 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 405 | 459 | 2.9E-20 | IPR037094 |
| Gene3D | G3DSA:2.70.98.30 | - | 604 | 876 | 2.3E-99 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 479 | 595 | 1.4E-25 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 896 | 1018 | 2.4E-31 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 44 | 325 | 8.0E-120 | IPR027291 |
| SMART | SM00872 | Alpha_mann_mid_2 | 362 | 435 | 3.4E-20 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_042990444.1 | alpha-mannosidase [Carya illinoinensis] | 0 |
| Q9FKW9 | Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g66150 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5N6QU88 | Alpha-mannosidase OS=Carpinus fangiana OX=176857 GN=FH972_006989 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology