Basic Information
Locus ID:
Ceq06G0156
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 1427704 | 1437181 | - | Ceq06G0156 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 116,485.28 Da | 32.29 | 81.54 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 44 | 348 | 8.88534E-172 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 389 | 481 | 2.9E-19 | IPR015341 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 931 | 1035 | 1.1E-11 | IPR041147 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 637 | 849 | 1.7E-50 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 45 | 384 | 5.8E-89 | IPR000602 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 388 | 483 | 1.57E-26 | IPR028995 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 495 | 1039 | 8.95E-147 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 33 | 385 | 3.63E-103 | IPR011330 |
| Gene3D | G3DSA:2.60.40.1180 | - | 499 | 610 | 7.5E-26 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 353 | 431 | 1.6E-31 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 919 | 1039 | 1.9E-33 | - |
| Gene3D | G3DSA:2.70.98.30 | - | 632 | 897 | 5.0E-100 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 432 | 487 | 4.4E-20 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 44 | 352 | 8.8E-114 | IPR027291 |
| SMART | SM00872 | Alpha_mann_mid_2 | 389 | 463 | 4.2E-22 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_018829558.1 | alpha-mannosidase [Juglans regia] | 0 |
| C0HJB3 | Alpha-mannosidase OS=Canavalia ensiformis OX=3823 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QU88 | Alpha-mannosidase OS=Carpinus fangiana OX=176857 GN=FH972_006989 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology