Basic Information
Locus ID:
Ceq05G2104
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 23306289 | 23317585 | + | Ceq05G2104 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 86,789.37 Da | 35.95 | 93.82 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 300 | 385 | 6.23713E-17 | - |
| CDD | cd00028 | B_lectin | 41 | 148 | 1.10909E-17 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 505 | 645 | 4.1E-25 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 77 | 171 | 2.3E-24 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 310 | 367 | 1.1E-12 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 76 | 176 | 3.93E-21 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 474 | 730 | 4.05E-53 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 145 | 4.5E-17 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 466 | 559 | 3.5E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 647 | 738 | 2.1E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 560 | 646 | 2.2E-22 | - |
| SMART | SM00220 | serkin_6 | 491 | 721 | 1.1E-10 | IPR000719 |
| SMART | SM00473 | ntp_6 | 308 | 384 | 2.8E-7 | IPR003609 |
| SMART | SM00108 | blect_4 | 28 | 148 | 3.7E-12 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 1 | 777 | 1.6E-171 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 302 | 385 | 9.933714 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 470 | 741 | 20.965681 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 28 | 146 | 14.550611 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 601 | 613 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11350.1 | S-domain-1 13. | 0 |
| RefSeq | XP_018812365.1 | receptor-like serine/threonine-protein kinase SD1-6 isoform X1 [Juglans regia] | 0 |
| Q9LPZ9 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I4DYZ0 | Receptor-like serine/threonine-protein kinase OS=Juglans regia OX=51240 GN=LOC108984766 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129710, pistato.v30160120 |
| Casuarinaceae | Casuarina equisetifolia | 14 | Ceq01G1391, Ceq01G1393, Ceq01G1394, Ceq01G1396, Ceq01G1397 ... |
| Casuarinaceae | Casuarina glauca | 25 | Cgl01G1556, Cgl01G1558, Cgl01G1559, Cgl01G1561, Cgl01G1566 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1050 |
| Poaceae | Triticum aestivum | 1 | TraesCS2A02G535100.1 |