Basic Information
Locus ID:
Ceq05G2102
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 23284656 | 23288067 | + | Ceq05G2102 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.11 | 80,331.28 Da | 36.28 | 92.48 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 214 | 299 | 6.73053E-19 | - |
| CDD | cd14066 | STKc_IRAK | 409 | 673 | 6.9385E-90 | - |
| Pfam | PF01453 | D-mannose binding lectin | 3 | 76 | 7.0E-14 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 221 | 279 | 5.1E-13 | IPR003609 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 675 | 721 | 1.3E-8 | IPR021820 |
| Pfam | PF00069 | Protein kinase domain | 406 | 606 | 3.2E-46 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 3 | 89 | 7.98E-15 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 386 | 691 | 6.47E-82 | IPR011009 |
| SUPERFAMILY | SSF57414 | Hairpin loop containing domain-like | 229 | 280 | 4.32E-5 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 1 | 60 | 5.0E-6 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 478 | 2.3E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 681 | 2.1E-57 | - |
| SMART | SM00220 | serkin_6 | 403 | 680 | 3.5E-33 | IPR000719 |
| SMART | SM00473 | ntp_6 | 222 | 298 | 6.7E-11 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 1 | 721 | 1.7E-204 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 403 | 680 | 38.435307 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 216 | 299 | 10.024641 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 524 | 536 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11350.1 | S-domain-1 13. | 0 |
| RefSeq | XP_018812365.1 | receptor-like serine/threonine-protein kinase SD1-6 isoform X1 [Juglans regia] | 0 |
| Q9LPZ9 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I4DYZ0 | Receptor-like serine/threonine-protein kinase OS=Juglans regia OX=51240 GN=LOC108984766 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129710, pistato.v30160120 |
| Casuarinaceae | Casuarina equisetifolia | 14 | Ceq01G1391, Ceq01G1393, Ceq01G1394, Ceq01G1396, Ceq01G1397 ... |
| Casuarinaceae | Casuarina glauca | 25 | Cgl01G1556, Cgl01G1558, Cgl01G1559, Cgl01G1561, Cgl01G1566 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1050 |
| Poaceae | Triticum aestivum | 1 | TraesCS2A02G535100.1 |