Basic Information
Locus ID:
Ceq05G2101
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 23272216 | 23276441 | + | Ceq05G2101 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.78 | 91,316.19 Da | 34.01 | 94.02 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 298 | 383 | 2.38656E-18 | - |
| CDD | cd14066 | STKc_IRAK | 490 | 766 | 3.79231E-85 | - |
| CDD | cd00028 | B_lectin | 71 | 146 | 7.39723E-19 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 218 | 287 | 2.2E-6 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 75 | 160 | 1.9E-21 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 305 | 363 | 1.2E-12 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 487 | 709 | 2.6E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 467 | 783 | 3.37E-79 | IPR011009 |
| SUPERFAMILY | SSF57414 | Hairpin loop containing domain-like | 313 | 360 | 7.06E-5 | - |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 73 | 202 | 2.67E-21 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 23 | 143 | 1.8E-14 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 457 | 559 | 5.4E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 560 | 773 | 2.9E-52 | - |
| SMART | SM00108 | blect_4 | 28 | 146 | 3.6E-11 | IPR001480 |
| SMART | SM00220 | serkin_6 | 484 | 773 | 7.2E-31 | IPR000719 |
| SMART | SM00473 | ntp_6 | 306 | 382 | 4.9E-9 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 1 | 814 | 1.1E-211 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 28 | 144 | 12.427886 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 300 | 383 | 9.913507 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 484 | 781 | 38.195026 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 605 | 617 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.1 | receptor kinase 1. An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain. | 0 |
| RefSeq | XP_018812365.1 | receptor-like serine/threonine-protein kinase SD1-6 isoform X1 [Juglans regia] | 0 |
| Q39086 | Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4DYZ0 | Receptor-like serine/threonine-protein kinase OS=Juglans regia OX=51240 GN=LOC108984766 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 2 | pistato.v30129710, pistato.v30160120 |
| Casuarinaceae | Casuarina equisetifolia | 14 | Ceq01G1391, Ceq01G1393, Ceq01G1394, Ceq01G1396, Ceq01G1397 ... |
| Casuarinaceae | Casuarina glauca | 25 | Cgl01G1556, Cgl01G1558, Cgl01G1559, Cgl01G1561, Cgl01G1566 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1050 |
| Poaceae | Triticum aestivum | 1 | TraesCS2A02G535100.1 |