Basic Information
Locus ID:
Ceq05G1779
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 19358000 | 19363519 | + | Ceq05G1779 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 65,547.23 Da | 44.13 | 76.38 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 16 | 226 | 2.9E-83 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 266 | 496 | 4.9E-62 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 284 | 460 | 2.1E-226 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 25 | 497 | 2.1E-226 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 582 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_042955136.1 | proteinaceous RNase P 2-like [Carya illinoinensis] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9IVH5 | ribonuclease P OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56784 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology