Basic Information
Locus ID:
Ceq05G1739
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Short Name:
UBP16
Description:
ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 18869907 | 18871186 | - | Ceq05G1739 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 41,537.99 Da | 40.15 | 86.63 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 80 | 360 | 3.2E-42 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 80 | 362 | 9.03E-66 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 74 | 367 | 1.3E-69 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 78 | 363 | 38.772865 | IPR028889 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24560.1 | ubiquitin-specific protease 16. Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation. | 0 |
| RefSeq | XP_035538732.1 | ubiquitin carboxyl-terminal hydrolase 17-like [Juglans regia] | 0 |
| Q9SB51 | Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana OX=3702 GN=UBP16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6R7H5 | Ubiquitin carboxyl-terminal hydrolase 16 OS=Carpinus fangiana OX=176857 GN=FH972_013689 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology