Basic Information
Locus ID:
Ceq05G1615
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 16915540 | 16936137 | + | Ceq05G1615 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 98,411.24 Da | 53.27 | 74.97 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 201 | 340 | 2.82814E-33 | - |
| CDD | cd00821 | PH | 51 | 140 | 8.26074E-11 | - |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 640 | 720 | 1.2E-21 | IPR025757 |
| Pfam | PF00620 | RhoGAP domain | 201 | 345 | 1.3E-31 | IPR000198 |
| Pfam | PF00169 | PH domain | 53 | 144 | 1.6E-11 | IPR001849 |
| SUPERFAMILY | SSF50729 | PH domain-like | 53 | 149 | 6.03E-15 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 201 | 394 | 1.81E-34 | IPR008936 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 170 | 394 | 1.8E-41 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 43 | 154 | 2.2E-13 | IPR011993 |
| SMART | SM00233 | PH_update | 41 | 147 | 1.9E-10 | IPR001849 |
| SMART | SM00324 | RhoGAP_3 | 198 | 389 | 3.9E-29 | IPR000198 |
| ProSiteProfiles | PS50003 | PH domain profile. | 42 | 145 | 12.3481 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 192 | 392 | 29.969154 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 790 | 812 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 535 | - | - |
| Coils | Coil | Coil | 689 | 723 | - | - |
| Coils | Coil | Coil | 598 | 625 | - | - |
| Coils | Coil | Coil | 630 | 664 | - | - |
| Coils | Coil | Coil | 842 | 869 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_018825484.2 | rho GTPase-activating protein 7-like [Juglans regia] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A660KP94 | Rho GTPase-activating protein 7-like OS=Carpinus fangiana OX=176857 GN=FH972_009859 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology