Basic Information
Locus ID:
Ceq05G1526
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 15506126 | 15526364 | + | Ceq05G1526 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 131,070.49 Da | 43.49 | 78.76 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 56 | 179 | 2.27574E-40 | IPR002083 |
| CDD | cd02659 | peptidase_C19C | 197 | 525 | 6.14878E-167 | - |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 624 | 876 | 1.3E-75 | IPR024729 |
| Pfam | PF00917 | MATH domain | 62 | 180 | 6.3E-19 | IPR002083 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 886 | 1096 | 2.0E-55 | IPR029346 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 199 | 520 | 8.2E-45 | IPR001394 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 52 | 186 | 1.31E-40 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 194 | 551 | 1.2E-97 | IPR038765 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 53 | 195 | 1.1E-52 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 802 | 899 | 9.1E-26 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 196 | 524 | 9.4E-89 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 684 | 801 | 3.2E-43 | - |
| SMART | SM00061 | math_3 | 56 | 160 | 5.2E-18 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 199 | 523 | 39.931602 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 54 | 179 | 38.903259 | IPR002083 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 439 | 456 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 200 | 215 | - | IPR018200 |
| Coils | Coil | Coil | 532 | 563 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G11910.1 | ubiquitin-specific protease 13. | 0 |
| RefSeq | XP_030960429.1 | ubiquitin carboxyl-terminal hydrolase 12-like [Quercus lobata] | 0 |
| Q84WU2 | Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7N2KMU4 | ubiquitinyl hydrolase 1 OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology