Basic Information
Locus ID:
Ceq05G1416
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 14112231 | 14118171 | - | Ceq05G1416 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 40,122.17 Da | 44.43 | 85.57 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 8 | 203 | 1.0E-71 | IPR027356 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 1 | 227 | 74.43499 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 270 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_023915457.1 | BTB/POZ domain-containing protein NPY4-like [Quercus suber] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QMK9 | NPH3 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_004116 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology