Basic Information
Locus ID:
Ceq05G1210
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 11898099 | 11902550 | + | Ceq05G1210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 71,778.44 Da | 48.41 | 85.13 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 20 | 118 | 9.32257E-26 | - |
| Pfam | PF00069 | Protein kinase domain | 420 | 632 | 5.1E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 633 | 3.51E-63 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 649 | 1.3E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 398 | 497 | 2.3E-27 | - |
| SMART | SM00220 | serkin_6 | 420 | 651 | 2.3E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 420 | 653 | 35.297558 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 426 | 447 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 542 | 554 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 164 | - | - |
| Coils | Coil | Coil | 325 | 394 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_041002265.1 | U-box domain-containing protein 33-like [Juglans microcarpa x Juglans regia] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6QN45 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003923 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg4509 |
| Casuarinaceae | Casuarina equisetifolia | 6 | Ceq01G0563, Ceq05G0394, Ceq05G0397, Ceq05G0400, Ceq05G1210 ... |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G1223 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-37323 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g13790 |