Basic Information
Locus ID:
Ceq05G0675
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 5840701 | 5844244 | + | Ceq05G0675 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 38,473.44 Da | 51.62 | 64.53 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 201 | 244 | 1.2E-6 | IPR001841 |
| Pfam | PF14599 | Zinc-ribbon | 250 | 307 | 8.9E-25 | IPR039512 |
| Pfam | PF05495 | CHY zinc finger | 36 | 104 | 8.9E-11 | IPR008913 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 32 | 109 | 8.24E-12 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 200 | 248 | 1.47E-10 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 165 | 195 | 5.36E-7 | IPR037275 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 189 | 265 | 8.0E-11 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 273 | 315 | 1.3E-20 | - |
| SMART | SM00184 | ring_2 | 202 | 244 | 5.9E-7 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 136 | 201 | 14.024926 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 29 | 120 | 19.247814 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 202 | 245 | 11.795887 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22920.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_042957150.1 | E3 ubiquitin-protein ligase RZFP34 [Carya illinoinensis] | 0 |
| Q9FFB6 | E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1NQG4 | E3 ubiquitin-protein ligase RZFP34 OS=Carya illinoinensis OX=32201 GN=CIPAW_13G123000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology