Basic Information
Locus ID:
Ceq05G0402
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 3422714 | 3434646 | + | Ceq05G0402 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.13 | 110,503.50 Da | 49.99 | 95.81 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 9 | 132 | 5.07879E-30 | - |
| Pfam | PF00069 | Protein kinase domain | 444 | 702 | 5.3E-40 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 906 | 986 | 1.9E-9 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 28 | 128 | 1.67E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 422 | 705 | 2.43E-66 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 907 | 986 | 6.61E-21 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 705 | 853 | 1.23E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 515 | 708 | 1.0E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 879 | 1.5E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 737 | 775 | 2.0E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 898 | 987 | 2.6E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 412 | 514 | 2.0E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 3 | 133 | 5.7E-7 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 709 | 736 | 2.2E-6 | - |
| SMART | SM00220 | serkin_6 | 442 | 707 | 2.1E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 442 | 716 | 36.004257 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 789 | 987 | 16.711348 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 448 | 469 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 560 | 572 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 282 | - | - |
| Coils | Coil | Coil | 346 | 376 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_041002265.1 | U-box domain-containing protein 33-like [Juglans microcarpa x Juglans regia] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A1VQU2 | U-box domain-containing protein 33 OS=Morella rubra OX=262757 GN=CJ030_MR5G000865 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq04G0093, Ceq05G0389, Ceq05G0391, Ceq05G0392, Ceq05G0402 |
| Casuarinaceae | Casuarina glauca | 6 | Cgl04G0111, Cgl04G0118, Cgl04G0132, Cgl04G0141, Cgl05G0404 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2803 |