Basic Information
Locus ID:
Ceq05G0391
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 3369286 | 3374240 | - | Ceq05G0391 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 46,138.02 Da | 41.09 | 116.35 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 332 | 412 | 4.3E-9 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 7 | 102 | 1.4E-8 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 140 | 278 | 1.3E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 105 | 3.56E-17 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 105 | 279 | 6.2E-36 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 413 | 1.75E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 311 | 1.3E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 109 | 138 | 8.0E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 324 | 414 | 1.2E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 108 | 1.3E-18 | - |
| SMART | SM00220 | serkin_6 | 36 | 290 | 1.3E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 293 | 17.870337 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 284 | 414 | 10.209708 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 141 | 153 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_035548395.1 | U-box domain-containing protein 33-like [Juglans regia] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6QN45 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003923 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq04G0093, Ceq05G0389, Ceq05G0391, Ceq05G0392, Ceq05G0402 |
| Casuarinaceae | Casuarina glauca | 6 | Cgl04G0111, Cgl04G0118, Cgl04G0132, Cgl04G0141, Cgl05G0404 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2803 |