Basic Information
Locus ID:
Ceq05G0389
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 3327823 | 3355874 | - | Ceq05G0389 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.75 | 193,956.95 Da | 50.46 | 87.62 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 909 | 1053 | 5.61567E-36 | - |
| CDD | cd01989 | STK_N | 20 | 143 | 6.95316E-29 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 1666 | 1707 | 6.0411E-22 | - |
| Pfam | PF04564 | U-box domain | 1663 | 1732 | 7.5E-15 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 449 | 708 | 6.5E-40 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1387 | 1631 | 2.1E-35 | IPR001245 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1656 | 1732 | 9.71E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1360 | 1637 | 7.15E-62 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 721 | 871 | 1.71E-13 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 42 | 138 | 2.2E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 427 | 709 | 4.05E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1662 | 1732 | 2.2E-25 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1455 | 1649 | 4.1E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 417 | 519 | 2.5E-25 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 12 | 143 | 6.0E-7 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 712 | 881 | 7.1E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 520 | 711 | 3.3E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1351 | 1454 | 1.6E-23 | - |
| SMART | SM00220 | serkin_6 | 447 | 716 | 1.7E-34 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 1665 | 1728 | 3.6E-26 | IPR003613 |
| SMART | SM00220 | serkin_6 | 1382 | 1639 | 7.4E-24 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 1661 | 1732 | 37.896744 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1382 | 1642 | 31.608583 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 447 | 717 | 35.424763 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 453 | 474 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 565 | 577 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1339 | 1359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1339 | 1363 | - | - |
| Coils | Coil | Coil | 1212 | 1232 | - | - |
| Coils | Coil | Coil | 351 | 420 | - | - |
| Coils | Coil | Coil | 1257 | 1361 | - | - |
| Coils | Coil | Coil | 309 | 329 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_042979912.1 | U-box domain-containing protein 33-like isoform X2 [Carya illinoinensis] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A1VNF3 | U-box domain-containing protein 33 OS=Morella rubra OX=262757 GN=CJ030_MR5G000863 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq04G0093, Ceq05G0389, Ceq05G0391, Ceq05G0392, Ceq05G0402 |
| Casuarinaceae | Casuarina glauca | 6 | Cgl04G0111, Cgl04G0118, Cgl04G0132, Cgl04G0141, Cgl05G0404 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2803 |