Basic Information
Locus ID:
Ceq05G0386
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 3296689 | 3304249 | - | Ceq05G0386 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 100,197.05 Da | 50.95 | 86.33 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 46 | 199 | 2.01995E-49 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 830 | 871 | 6.21225E-24 | - |
| CDD | cd14066 | STKc_IRAK | 538 | 806 | 8.17478E-85 | - |
| Pfam | PF04564 | U-box domain | 827 | 896 | 1.9E-17 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 535 | 794 | 1.2E-39 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 815 | 896 | 3.53E-25 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 49 | 162 | 7.7E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 509 | 795 | 2.56E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 517 | 610 | 2.5E-24 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 824 | 896 | 1.8E-28 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 611 | 811 | 6.1E-49 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 38 | 164 | 2.2E-7 | IPR014729 |
| SMART | SM00220 | serkin_6 | 532 | 806 | 6.1E-32 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 829 | 892 | 1.9E-30 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 532 | 807 | 32.908913 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 825 | 896 | 39.940102 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 656 | 668 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 538 | 559 | - | IPR017441 |
| Coils | Coil | Coil | 414 | 504 | - | - |
| Coils | Coil | Coil | 362 | 382 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_018835148.1 | U-box domain-containing protein 33-like [Juglans regia] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2I4FU21 | U-box domain-containing protein 33-like OS=Juglans regia OX=51240 GN=LOC109002039 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology