Basic Information
Locus ID:
Ceq05G0316
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 2658881 | 2662257 | + | Ceq05G0316 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 45,691.41 Da | 39.34 | 75.51 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 122 | 416 | 1.7E-89 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 305 | 406 | 4.81E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 302 | 418 | 7.1E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 305 | 407 | 25.655828 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 142 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_041018030.1 | auxin-responsive protein IAA27-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R3XZ38 | Auxin-responsive protein OS=Carya cathayensis OX=139927 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology