Basic Information
Locus ID:
Ceq04G2515
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Short Name:
CCT3
Description:
T-complex protein 1 subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 30116604 | 30120302 | + | Ceq04G2515 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 64,959.82 Da | 39.46 | 104.75 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 121 | 251 | 7.5E-7 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 285 | 554 | 1.4E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 265 | 561 | 2.97E-64 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 106 | 251 | 5.59E-15 | IPR027417 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 253 | 362 | 2.7E-28 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 103 | 252 | 3.7E-20 | IPR027417 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 363 | 567 | 5.9E-48 | - |
| SMART | SM00220 | serkin_6 | 284 | 560 | 3.8E-17 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 284 | 560 | 33.502541 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 408 | 420 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 0 |
| RefSeq | XP_035546989.1 | putative wall-associated receptor kinase-like 16 [Juglans regia] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2N9GSF3 | Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30143 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq04G2514, Ceq04G2515, Ceq04G2516 |
| Casuarinaceae | Casuarina glauca | 4 | Cgl03G2899, Cgl04G2738, Cgl04G2739, Cgl05G0316 |