Basic Information
Locus ID:
Ceq04G2441
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 29456298 | 29457735 | - | Ceq04G2441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 42,775.91 Da | 43.74 | 80.10 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 43 | 376 | 1.96103E-131 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 48 | 370 | 5.7E-75 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 277 | 341 | 1.7E-14 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 45 | 383 | 4.22E-71 | IPR017853 |
| Gene3D | G3DSA:3.10.50.10 | - | 276 | 341 | 1.0E-104 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 57 | 370 | 1.0E-104 | - |
| SMART | SM00636 | 2g34 | 45 | 370 | 1.5E-99 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 45 | 386 | 69.340332 | IPR001223 |
| ProSitePatterns | PS01095 | Glycosyl hydrolases family 18 (GH18) active site signature. | 149 | 157 | - | IPR001579 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_018850392.2 | class V chitinase CHIT5a-like [Juglans regia] | 0 |
| A0A072VEP0 | Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9F8C6 | GH18 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10916 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology