Basic Information
Locus ID:
Ceq04G2420
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 29169036 | 29179844 | - | Ceq04G2420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 103,245.49 Da | 47.10 | 64.57 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 643 | 687 | 6.95281E-4 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 40 | 252 | 3.26E-9 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 640 | 682 | 2.26E-6 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 640 | 689 | 3.2E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 518 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 774 | 814 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 741 | 951 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 901 | 918 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 919 | 937 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 741 | 759 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 867 | 900 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 640 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 834 | 866 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 710 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 295 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_042987466.1 | nucleolar and coiled-body phosphoprotein 1 isoform X1 [Carya illinoinensis] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6R8T7 | Tudor domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_013070 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology