Basic Information
Locus ID:
Ceq04G2341
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 28269845 | 28273800 | + | Ceq04G2341 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 69,808.12 Da | 45.61 | 104.25 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 245 | 268 | 0.073 | IPR001611 |
| Pfam | PF00646 | F-box domain | 67 | 111 | 1.0E-6 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 484 | 502 | 0.49 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 272 | 294 | 0.63 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 540 | 561 | 0.018 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 66 | 104 | 5.1E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 353 | 585 | 1.07E-35 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 180 | 423 | 2.35E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 449 | 649 | 6.1E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 167 | 246 | 1.3E-15 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 59 | 107 | 4.3E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 247 | 448 | 4.5E-39 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 590 | 615 | 0.37 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 538 | 563 | 9.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 246 | 271 | 1.5E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 458 | 483 | 25.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 484 | 509 | 0.0011 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 194 | 219 | 0.007 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 272 | 297 | 3.7E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 378 | 403 | 0.014 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 352 | 377 | 0.066 | IPR006553 |
| SMART | SM00256 | fbox_2 | 70 | 110 | 7.7E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 511 | 536 | 7.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 564 | 588 | 5.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 220 | 245 | 2.3E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 404 | 429 | 79.0 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 141 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_023881964.1 | EIN3-binding F-box protein 1 [Quercus suber] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4Q6A7 | F-box domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_029236 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology