Basic Information
Locus ID:
Ceq04G2251
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 27461883 | 27467967 | - | Ceq04G2251 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 65,414.70 Da | 48.98 | 73.37 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 103 | 306 | 9.9E-75 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 347 | 573 | 6.7E-75 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 365 | 539 | 7.8E-235 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 111 | 576 | 7.8E-235 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 114 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_018839463.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Juglans regia] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RXF9 | ribonuclease P OS=Carpinus fangiana OX=176857 GN=FH972_020776 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology