Basic Information
Locus ID:
Ceq04G2047
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 25173444 | 25174550 | - | Ceq04G2047 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 40,253.71 Da | 63.44 | 76.00 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 62 | 105 | 7.90229E-19 | - |
| Pfam | PF13639 | Ring finger domain | 62 | 105 | 2.8E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 42 | 110 | 3.53E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 37 | 112 | 2.5E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 63 | 104 | 2.0E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 63 | 105 | 12.607302 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 294 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05810.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_042989754.1 | RING-H2 finger protein ATL43 [Carya illinoinensis] | 0 |
| Q5EAE9 | RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6R6X6 | RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_013492 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology