Basic Information
Locus ID:
Ceq04G1891
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 23332929 | 23335565 | + | Ceq04G1891 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.63 | 22,892.62 Da | 50.16 | 74.00 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 23 | 159 | 3.1209E-50 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 28 | 158 | 4.6E-39 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 20 | 166 | 2.36E-46 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 11 | 179 | 5.3E-50 | IPR016135 |
| SMART | SM00212 | ubc_7 | 20 | 164 | 3.2E-49 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 16 | 164 | 42.071285 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 89 | 105 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 200 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63800.1 | ubiquitin-conjugating enzyme 5. | 0 |
| RefSeq | XP_030940708.1 | ubiquitin-conjugating enzyme E2-23 kDa-like [Quercus lobata] | 0 |
| P42749 | Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2N9GGP9 | UBC core domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology