Basic Information
Locus ID:
Ceq04G1541
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 20060852 | 20062270 | - | Ceq04G1541 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 30,527.76 Da | 50.26 | 93.53 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 70 | 219 | 2.4E-22 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 8 | 65 | 1.9E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 222 | 2.97E-54 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 60 | 231 | 6.9E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 59 | 2.5E-25 | - |
| SMART | SM00220 | serkin_6 | 2 | 222 | 2.2E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 227 | 20.739538 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_010647189.1 | PREDICTED: cysteine-rich receptor-like protein kinase 10 [Vitis vinifera] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | F6H7Y8 | Protein kinase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_00s0409g00040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1541 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g57540.1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-31274 |