Basic Information
Locus ID:
Ceq04G1423
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
fiber protein Fb15
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 18632715 | 18641014 | - | Ceq04G1423 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 45,874.22 Da | 43.82 | 95.65 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 238 | 308 | 1.6E-14 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 78 | 1.9E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 197 | 4.86E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 185 | 313 | 5.39E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 219 | 319 | 4.2E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 216 | 3.0E-45 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 96 | 409 | 13.559466 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 213 | 235 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 258 | 270 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30010.1 | 0 | |
| RefSeq | XP_015894259.1 | uncharacterized protein LOC107428239 [Ziziphus jujuba var. spinosa] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5H2XKM3 | Leucine-rich repeat protein kinase family protein OS=Prunus dulcis OX=3755 GN=Prudu_524S000400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah013311, Ah022138 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g062820 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg58854, Sbi_jg63754 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23135 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00013010 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000005705 |
| Amaranthaceae | Chenopodium quinoa | 7 | CQ.Regalona.r1.1BG0006170, CQ.Regalona.r1.3AG0022800 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30262790 |
| Arecaceae | Cocos nucifera | 2 | contig69078992G000010, contig69315729G000010 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103705182, gene-LOC103711646, gene-LOC120105013 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.3533.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri1G29355 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G30010.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10026677m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g27810.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g084380.2N, BniB03g011140.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1423 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g04690 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g05610 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2443 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00037945 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.537, BH07.664, CH07.543 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0103350, gene-QOZ80_2BG0156670 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0570470.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco03G003750, Oco04G003710 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g07910.2 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G055800 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr06G034190, Chr15G025430 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G315600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG021530, gene_TRIDC6BG027250 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G153900.1.cds1, TraesCS6B02G181600.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb233510_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-29839, nbis-gene-55025 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g12281, Zma_g15038 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g26700 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-13274 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3693 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16712 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000033l.197 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16570 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14679 |
| Salicaceae | Populus euphratica | 2 | populus_peu05835, populus_peu11202 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132633596, gene-LOC132644902 |
| Solanaceae | Solanum chilense | 1 | SOLCI005093400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107023893 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_16736 |
| Zosteraceae | Zostera marina | 1 | Zosma01g04420.v3.1 |