Basic Information
Locus ID:
Ceq04G1411
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 18379562 | 18390000 | + | Ceq04G1411 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 147,348.31 Da | 49.13 | 71.53 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 190 | 285 | 1.09236E-43 | - |
| CDD | cd13999 | STKc_MAP3K-like | 1050 | 1307 | 1.25714E-113 | - |
| Pfam | PF00564 | PB1 domain | 203 | 286 | 3.8E-20 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1046 | 1307 | 1.2E-61 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1035 | 1306 | 1.05E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 202 | 291 | 5.61E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1037 | 1131 | 9.7E-27 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 205 | 286 | 2.9E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1132 | 1328 | 6.2E-54 | - |
| SMART | SM00220 | serkin_6 | 1044 | 1311 | 7.4E-60 | IPR000719 |
| SMART | SM00666 | PB1_new | 201 | 287 | 2.8E-30 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1044 | 1311 | 41.290375 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1050 | 1075 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1169 | 1181 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1278 | 1300 | 4.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1126 | 1139 | 4.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1234 | 1256 | 4.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1163 | 1181 | 4.4E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 783 | 806 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 604 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 614 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_041027697.1 | uncharacterized protein LOC121267739 isoform X1 [Juglans microcarpa x Juglans regia] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QCK4 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_000690 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology