Basic Information
Locus ID:
Ceq04G1239
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 14915562 | 14922352 | + | Ceq04G1239 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 66,492.39 Da | 44.35 | 85.07 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 79 | 562 | 3.4E-67 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 77 | 563 | 1.45E-79 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 448 | 572 | 2.8E-27 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 70 | 279 | 1.2E-64 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 79 | 590 | 38.100513 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 540 | 557 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 406 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_018846512.1 | ubiquitin carboxyl-terminal hydrolase 8-like [Juglans regia] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6RU87 | Ubiquitin carboxyl-terminal hydrolase OS=Carpinus fangiana OX=176857 GN=FH972_020062 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology