Basic Information
Locus ID:
Ceq04G1001
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 11455446 | 11465222 | - | Ceq04G1001 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 43,074.24 Da | 40.51 | 103.74 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 70 | 321 | 1.7E-77 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 74 | 320 | 6.74E-36 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 97 | 386 | 1.4E-82 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 252 | 326 | 18.996208 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 98 | 249 | 21.495478 | IPR020588 |
| ProSitePatterns | PS00321 | recA signature. | 267 | 275 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 182 | 211 | 1.3E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 350 | 367 | 1.3E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 264 | 292 | 1.3E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 297 | 326 | 1.3E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 148 | 177 | 1.3E-56 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 220 | 249 | 1.3E-56 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_030957883.1 | DNA repair protein recA homolog 2, mitochondrial-like [Quercus lobata] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6RI61 | DNA repair protein recA homolog 2, mitochondrial OS=Carpinus fangiana OX=176857 GN=FH972_016766 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology