Basic Information
Locus ID:
Ceq04G0858
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 9629173 | 9645699 | - | Ceq04G0858 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 107,374.78 Da | 55.04 | 86.22 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06337 | DUSP domain | 38 | 144 | 1.8E-23 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 327 | 930 | 1.3E-82 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 16 | 144 | 1.26E-26 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 325 | 933 | 4.91E-102 | IPR038765 |
| Gene3D | G3DSA:3.30.2230.10 | - | 5 | 157 | 7.4E-36 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 158 | 243 | 1.3E-12 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 312 | 556 | 1.8E-66 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 659 | 941 | 1.2E-51 | - |
| SMART | SM00695 | dusp | 34 | 147 | 3.5E-34 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 327 | 933 | 53.192711 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 15 | 144 | 18.215906 | IPR006615 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 875 | 892 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 328 | 343 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_018835754.1 | ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Juglans regia] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6RW56 | Ubiquitin carboxyl-terminal hydrolase OS=Carpinus fangiana OX=176857 GN=FH972_019968 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology