Basic Information
Locus ID:
Ceq04G0538
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 6338543 | 6344767 | + | Ceq04G0538 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 70,546.12 Da | 46.83 | 85.54 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 123 | 7.0176E-48 | - |
| Pfam | PF03000 | NPH3 family | 214 | 479 | 3.1E-97 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 115 | 1.4E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 115 | 4.55E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 6 | 131 | 1.9E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 122 | 2.5E-4 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 12.474292 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 214 | 503 | 95.634544 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 616 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 602 | 635 | - | - |
| Coils | Coil | Coil | 544 | 578 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_041024114.1 | BTB/POZ domain-containing protein At1g30440-like [Juglans microcarpa x Juglans regia] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5N6QCB0 | NPH3 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_000849 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology