Basic Information
Locus ID:
Ceq04G0093
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr04 | 1211139 | 1224772 | + | Ceq04G0093 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 45,068.01 Da | 67.16 | 81.56 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 20 | 172 | 8.41482E-43 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 42 | 142 | 2.26E-6 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 11 | 146 | 1.6E-7 | IPR014729 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 250 | - | - |
| Coils | Coil | Coil | 269 | 289 | - | - |
| Coils | Coil | Coil | 311 | 380 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_030931111.1 | U-box domain-containing protein 33-like [Quercus lobata] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6QK46 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003919 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq04G0093, Ceq05G0389, Ceq05G0391, Ceq05G0392, Ceq05G0402 |
| Casuarinaceae | Casuarina glauca | 6 | Cgl04G0111, Cgl04G0118, Cgl04G0132, Cgl04G0141, Cgl05G0404 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-2803 |