Basic Information
Locus ID:
Ceq03G2515
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the glycosyl hydrolase 18 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 28732568 | 28739429 | - | Ceq03G2515 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 84,610.14 Da | 25.57 | 83.03 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 418 | 753 | 3.78808E-134 | - |
| CDD | cd02879 | GH18_plant_chitinase_class_V | 32 | 366 | 1.7684E-129 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 36 | 361 | 3.8E-66 | IPR001223 |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 422 | 748 | 4.3E-73 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 654 | 719 | 4.28E-11 | IPR029070 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 267 | 332 | 1.98E-8 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 34 | 362 | 1.44E-64 | IPR017853 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 420 | 748 | 6.11E-68 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 50 | 362 | 2.8E-92 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 653 | 719 | 3.4E-98 | IPR029070 |
| Gene3D | G3DSA:3.10.50.10 | - | 266 | 332 | 2.8E-92 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 438 | 748 | 3.4E-98 | - |
| SMART | SM00636 | 2g34 | 419 | 748 | 1.4E-92 | IPR011583 |
| SMART | SM00636 | 2g34 | 33 | 361 | 9.7E-76 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 419 | 764 | 67.316391 | IPR001223 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 33 | 374 | 59.220619 | IPR001223 |
| ProSitePatterns | PS01095 | Glycosyl hydrolases family 18 (GH18) active site signature. | 524 | 532 | - | IPR001579 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_023918556.1 | acidic mammalian chitinase-like [Quercus suber] | 0 |
| A0A072UR65 | Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1 | 0 | |
| TrEMBL | A0A835J3F8 | Glyco_18 domain-containing protein OS=Salix dunnii OX=1413687 GN=SADUNF_Sadunf18G0090800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology