Basic Information
Locus ID:
Ceq03G2435
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
ubiquitin protein ligase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 27991395 | 28001224 | - | Ceq03G2435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 107,238.85 Da | 47.16 | 76.54 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 492 | 652 | 1.22621E-26 | - |
| CDD | cd12108 | Hr-like | 145 | 273 | 2.37549E-18 | - |
| Pfam | PF14599 | Zinc-ribbon | 864 | 931 | 1.3E-15 | IPR039512 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 142 | 275 | 3.0E-6 | IPR012312 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 145 | 291 | 1.8E-18 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 485 | 725 | 1.8E-21 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 899 | 941 | 6.4E-17 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 810 | 839 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 824 | 838 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_023920867.1 | zinc finger protein BRUTUS isoform X1 [Quercus suber] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1VL06 | Putative RING finger protein C2F3.16 OS=Morella rubra OX=262757 GN=CJ030_MR5G019119 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology