Basic Information
Locus ID:
Ceq03G2032
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 23862017 | 23867444 | + | Ceq03G2032 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 49,884.12 Da | 51.54 | 64.24 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 208 | 3.3E-18 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 44 | 227 | 5.75E-36 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 233 | 4.1E-28 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 227 | 29.58901 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 275 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_018823688.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Juglans regia] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4EWA9 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Juglans regia OX=51240 GN=LOC108993283 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology