Basic Information
Locus ID:
Ceq03G1748
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
RNA polymerase II CTD heptapeptide repeat kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 20653317 | 20659834 | - | Ceq03G1748 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 25,894.80 Da | 34.27 | 103.53 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 9 | 133 | 9.2E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 134 | 2.67E-25 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 138 | 171 | 8.03E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 85 | 4.9E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 86 | 139 | 1.6E-7 | - |
| SMART | SM00220 | serkin_6 | 9 | 176 | 3.5E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 224 | 19.467478 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 144 | 156 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 120 | 132 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G48750.1 | cell division control 2. A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. | 0 |
| RefSeq | XP_047177103.1 | cell division control protein 2 homolog [Vigna umbellata] | 0 |
| P29619 | Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKA-2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0R0K2W2 | Protein kinase domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_05G123500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1748 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G1870 |