Basic Information
Locus ID:
Ceq03G1377
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Cell division cycle
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 16614168 | 16620939 | - | Ceq03G1377 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 52,317.84 Da | 48.10 | 79.50 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 147 | 439 | 9.06648E-42 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 297 | 336 | 2.2E-5 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 177 | 229 | 4.6E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 257 | 287 | 0.011 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 402 | 438 | 0.0018 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 143 | 440 | 8.55E-53 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 78 | 442 | 4.4E-101 | IPR015943 |
| SMART | SM00320 | WD40_4 | 165 | 205 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 400 | 439 | 1.0E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 249 | 288 | 2.9E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 294 | 336 | 5.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 208 | 245 | 1.4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 407 | 440 | 12.480124 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 407 | 440 | 10.390142 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 181 | 214 | 8.837541 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 301 | 345 | 9.171722 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 256 | 288 | 11.811761 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 256 | 288 | 9.862871 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 323 | 337 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 426 | 440 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27570.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_023888921.1 | cell division cycle 20.5, cofactor of APC complex-like [Quercus suber] | 0 |
| Q3E906 | Cell division cycle 20.5, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-5 PE=1 SV=3 | 0 | |
| TrEMBL | A0A5N6R7A3 | ANAPC4_WD40 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_013608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology