Basic Information
Locus ID:
Ceq03G0975
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Pentatricopeptide repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 10398909 | 10401778 | + | Ceq03G0975 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 51,617.96 Da | 27.79 | 71.63 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 326 | 455 | 2.40182E-43 | IPR033734 |
| CDD | cd09612 | Jacalin | 125 | 254 | 3.60554E-35 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 323 | 455 | 1.2E-33 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 125 | 255 | 1.5E-26 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 2 | 26 | 5.0E-6 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 115 | 254 | 2.09E-38 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 2 | 26 | 9.94E-8 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 312 | 454 | 2.49E-43 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 307 | 455 | 2.7E-53 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 1 | 33 | 1.2E-8 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 103 | 255 | 1.2E-47 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 323 | 456 | 5.1E-48 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 125 | 256 | 7.4E-35 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 114 | 256 | 45.205685 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 1 | 26 | 17.827801 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 312 | 456 | 52.76532 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_030950637.1 | jacalin-related lectin 3-like isoform X5 [Quercus lobata] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2N9IGY5 | Jacalin-related lectin 3-like OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51386 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology