Basic Information
Locus ID:
Ceq03G0518
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Lamin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 5866305 | 5867155 | + | Ceq03G0518 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 16,367.54 Da | 33.80 | 79.02 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 24 | 122 | 2.02512E-36 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 115 | 8.2E-26 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 123 | 2.52E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 22 | 128 | 1.7E-34 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 125 | 35.200916 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_050264107.1 | blue copper protein-like [Quercus robur] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6R3H9 | Phytocyanin domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_012049 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology