Basic Information
Locus ID:
Ceq03G0486
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 5575913 | 5581540 | - | Ceq03G0486 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 52,627.52 Da | 45.63 | 71.92 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 172 | 448 | 3.06032E-40 | - |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 205 | 259 | 2.3E-6 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 323 | 363 | 0.014 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 283 | 318 | 1.6E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 412 | 448 | 3.1E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 154 | 449 | 1.56E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 144 | 452 | 9.8E-124 | IPR015943 |
| SMART | SM00320 | WD40_4 | 279 | 318 | 4.1E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 238 | 275 | 0.12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 366 | 406 | 450.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 151 | 192 | 140.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 409 | 448 | 1.6E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 195 | 235 | 0.0098 | IPR001680 |
| SMART | SM00320 | WD40_4 | 321 | 363 | 5.0E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 203 | 244 | 10.374778 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 416 | 449 | 11.945589 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 286 | 327 | 13.783434 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 286 | 318 | 10.943775 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 416 | 449 | 14.451798 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 435 | 449 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_042953388.1 | protein FIZZY-RELATED 2-like isoform X2 [Carya illinoinensis] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1NXY3 | ANAPC4_WD40 domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_12G100600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology