Basic Information
Locus ID:
Ceq03G0232
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
DA1-related 1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 2550666 | 2553219 | - | Ceq03G0232 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 27,874.82 Da | 41.23 | 68.07 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09396 | LIM_DA1 | 101 | 153 | 6.5785E-16 | - |
| Pfam | PF01582 | TIR domain | 2 | 77 | 8.9E-9 | IPR000157 |
| SUPERFAMILY | SSF52200 | Toll/Interleukin receptor TIR domain | 2 | 53 | 7.06E-5 | IPR035897 |
| Gene3D | G3DSA:2.10.110.10 | Cysteine Rich Protein | 90 | 156 | 2.3E-8 | - |
| Gene3D | G3DSA:3.40.50.10140 | - | 1 | 80 | 2.2E-19 | IPR035897 |
| SMART | SM00132 | lim_4 | 100 | 152 | 0.0031 | IPR001781 |
| ProSiteProfiles | PS50104 | TIR domain profile. | 1 | 76 | 12.740498 | IPR000157 |
| ProSiteProfiles | PS50023 | LIM domain profile. | 99 | 159 | 8.5636 | IPR001781 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G36860.2 | - | 0 |
| RefSeq | XP_022739651.1 | protein DA1-related 1-like isoform X3 [Durio zibethinus] | 0 |
| Q8W4F0 | Protein DA1-related 1 OS=Arabidopsis thaliana OX=3702 GN=DAR1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2P5ALM4 | Zinc finger, LIM-type OS=Parasponia andersonii OX=3476 GN=PanWU01x14_320210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology