Basic Information
Locus ID:
Ceq03G0118
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
14 kDa proline-rich protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 1251413 | 1267116 | + | Ceq03G0118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 44,748.42 Da | 37.60 | 101.00 | 0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01958 | HPS_like | 73 | 155 | 1.91236E-28 | IPR027923 |
| CDD | cd01958 | HPS_like | 205 | 277 | 7.14093E-23 | IPR027923 |
| CDD | cd01958 | HPS_like | 342 | 425 | 5.85116E-28 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 74 | 156 | 1.4E-26 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 206 | 282 | 5.3E-20 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 343 | 425 | 6.8E-25 | IPR027923 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 346 | 425 | 6.38E-23 | IPR036312 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 209 | 280 | 8.72E-19 | IPR036312 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 77 | 156 | 3.19E-24 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 206 | 287 | 3.0E-22 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 74 | 159 | 2.6E-28 | IPR036312 |
| Gene3D | G3DSA:1.10.110.10 | - | 343 | 427 | 4.0E-26 | IPR036312 |
| SMART | SM00499 | aai_6 | 344 | 425 | 1.6E-6 | IPR016140 |
| SMART | SM00499 | aai_6 | 207 | 307 | 1.7E-4 | IPR016140 |
| SMART | SM00499 | aai_6 | 75 | 155 | 1.1E-5 | IPR016140 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | 5.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 205 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62510.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. | 0 |
| RefSeq | XP_025825385.1 | uncharacterized protein LOC112900803 [Panicum hallii] | 0 |
| Q39176 | Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0PCF7 | AAI domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G0118 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G0120, Cgl03G0132 |