Basic Information
Locus ID:
Ceq02G2428
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Belongs to the ATG8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 26446329 | 26448151 | - | Ceq02G2428 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 23,813.46 Da | 46.80 | 94.61 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16128 | Ubl_ATG8 | 50 | 203 | 1.69056E-64 | - |
| Pfam | PF02991 | Autophagy protein Atg8 ubiquitin like | 52 | 96 | 1.8E-12 | IPR004241 |
| Pfam | PF02991 | Autophagy protein Atg8 ubiquitin like | 129 | 206 | 2.5E-33 | IPR004241 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 120 | 206 | 4.55E-26 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 41 | 91 | 1.01E-12 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 34 | 108 | 2.6E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 114 | 207 | 7.6E-35 | - |
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04136 (Autophagy - other)
map04136 (Autophagy - other)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04138 (Autophagy - yeast)
map04138 (Autophagy - yeast)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04212 (Longevity regulating pathway - worm)
map04212 (Longevity regulating pathway - worm)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
map04621 (NOD-like receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62040.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_041008591.1 | autophagy-related protein 8C-like [Juglans microcarpa x Juglans regia] | 0 |
| M1C146 | Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J4V9J6 | Autophagy-related protein OS=Castanea mollissima OX=60419 GN=CMV_024521 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology