Basic Information
Locus ID:
Ceq02G2399
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
Cell division cycle 20.2, cofactor of APC complex-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 26132877 | 26136318 | - | Ceq02G2399 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 50,400.46 Da | 51.28 | 72.17 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 165 | 226 | 1.8E-7 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 249 | 284 | 4.6E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 385 | 420 | 6.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 297 | 335 | 0.2 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 130 | 421 | 3.02E-57 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 77 | 422 | 3.0E-111 | IPR015943 |
| SMART | SM00320 | WD40_4 | 203 | 241 | 0.044 | IPR001680 |
| SMART | SM00320 | WD40_4 | 381 | 420 | 2.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 115 | 156 | 410.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 245 | 284 | 2.4E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 161 | 200 | 0.019 | IPR001680 |
| SMART | SM00320 | WD40_4 | 338 | 378 | 14.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 293 | 335 | 0.0027 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 388 | 421 | 12.313033 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 252 | 284 | 13.449252 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 252 | 284 | 11.154684 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 168 | 209 | 10.842632 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 388 | 421 | 10.258324 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 407 | 421 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_040961338.1 | cell division cycle 20.2, cofactor of APC complex-like [Gossypium hirsutum] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2ZQN9 | Cell division cycle 20.1, cofactor of APC complex OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110785pilonHSYRG00122 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology