Basic Information
Locus ID:
Ceq02G2364
Species & Taxonomic ID:
Casuarina equisetifolia & 3523
Genome Assembly:
GCA_028551475.1
Description:
BAH and coiled-coil domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 25671062 | 25676250 | + | Ceq02G2364 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 31,334.42 Da | 42.59 | 69.64 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04714 | BAH_BAHCC1 | 22 | 163 | 5.34321E-55 | - |
| Pfam | PF01426 | BAH domain | 23 | 127 | 1.3E-22 | IPR001025 |
| Pfam | PF00628 | PHD-finger | 147 | 195 | 2.4E-10 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 144 | 196 | 3.99E-18 | IPR011011 |
| Gene3D | G3DSA:2.30.30.490 | - | 1 | 136 | 6.0E-31 | IPR043151 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 139 | 206 | 1.2E-19 | IPR013083 |
| SMART | SM00249 | PHD_3 | 147 | 194 | 3.5E-10 | IPR001965 |
| SMART | SM00439 | BAH_4 | 21 | 136 | 1.4E-37 | IPR001025 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 145 | 196 | 9.1607 | IPR019787 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 21 | 136 | 22.841089 | IPR001025 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 148 | 193 | - | IPR019786 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_037494130.1 | chromatin remodeling protein EBS isoform X1 [Jatropha curcas] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A4S4EA52 | Chromatin remodeling protein EBS OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_005140 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology